FUGATO-plus Collaborative Projects– Functional Genome Analysis in Animal Organisms
With the invitation of tenders and the approval of FUGATO, the German Federal Ministry of Education and Research (BMBF) has added a further research focus to the National Genome Research Area. On the 12th and 13th of December 2002, the foundation stone for the support measure FUGATO was laid in Berlin with a comprehensive workshop where industry and science met to jointly discuss and formulate the requirements for the „Functional Genome Analysis within the Animal Organism“ While so far, the support through the BMBF concentrated on research work in the fields of the plant genome (GABI), the microorganisms (GenoMik) and in research of human diseases and therapies (NGFN). New approaches are now going to be pointed out with the help of FUGATO to improve especially animal health and product quality. For further details please check the text for invitation of tenders and the FUGATO-brochure (pdf file, 1.6 MB, only in german). By June 6, 2004, a total of 14 cooperative project outlines have been submitted to the Project Executing Organization Jülich (PTJ). After the expertise through the Scientific Advisory Board, 6 cooperative projects for the species cattle, pig, and chicken have been recommended for support. These projects form a network of the leading academic institutes with participation of the industry, especially the livestock breeding industry. The research focus of these projects centers on animal health as well as on product quality and thus serves both animal welfare and the consumer. Since the characteristic features of animal health and product quality as a rule are complex and multifactorial and are marked by a low heritability, the genetic progress by means of conventional breeding programs is limited. Therefore, through the integration of functional genomic (transcriptomic, proteomic, metabolomic) and traditional methods of animal breeding, an effective selection should also be possible when it comes to traits with low heritability.
Total budget:
Coordinating Institution:
Business Platform FUGATO (FUGATO (IVF)) Details of FUGATO (IVF)
Work package leader:
- Länderinstitut für Bienenkunde Hohen Neuendorf e.V.
Details of Länderinstitut für Bienenkunde Hohen Neuendorf e.V.
HyBee - developing molecular methods for the selection Disease-resistant honeybees based on gene expression differences of sanitary and hygienic not worker bees - Faculty of Natural Sciences I - Institute of Biology
Details of Faculty of Natural Sciences I - Institute of Biology
FUGAPIS - functional genome analysis for disease resistance in the honey bee (Apis mellifera) - Ludwig-Maximilians-University of Munich
Details of Ludwig-Maximilians-University of Munich
REMEDY - Reproductive and metabolic problems in the dairy cow - University of Veterinary Medicine Hannover
Details of University of Veterinary Medicine Hannover
RePoRI - the development of genetic markers for resistance to respiratory infections in pigs - Leibniz Institute for Farm Animal Biology
Details of Leibniz Institute for Farm Animal Biology
Genetic dialogue - The importance epistatic mechanisms in the characteristic expression for beef and pork - Faculty of Veterinary Medicine - Veterinary Sciences Department
Details of Faculty of Veterinary Medicine - Veterinary Sciences Department
MeGA-M - Metabolomic and genomic analysis of milk for healthy dairy cows - Leibniz Institute for Farm Animal Biology
Details of Leibniz Institute for Farm Animal Biology
FEPROeXPRESS - Fetal Programming by food protein deficit and surplus: relevance to the productivity associated characteristics, tissue gene and protein expression in pigs - Institute of Animal Breeding and Husbandry
Details of Institute of Animal Breeding and Husbandry
GenoTrack - high-throughput SNP typing for the genomic selection in cattle, association population genetic studies and analyses of the bovine genome - Institute for animal breeding and animal husbandry with animal clinic
Details of Institute for animal breeding and animal husbandry with animal clinic
GENE-FL - Genetic bases of stability foundation for beef, pork, horse and sheep - Department of Animal Breeding and Genetics
Details of Department of Animal Breeding and Genetics
FUGATO + brain - developing an expert system to transfer the results of the functional animal genome research in breeding programmes
Subprojects
HyBee - developing molecular methods for the selection Disease-resistant honeybees based on gene expression differences of sanitary and hygienic not worker bees
- Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection krankheitsresistenter honey bees based on gene expression differences of hygienic and not hygienic worker bees; project part LIB - Detailsof Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection krankheitsresistenter honey bees based on gene expression differences of hygienic and not hygienic worker bees; project part LIB
- Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection pathogen resistent honey bees based on gene expression differences of hygienic and not hygienic not worker bees; project part FUB - Detailsof Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection pathogen resistent honey bees based on gene expression differences of hygienic and not hygienic not worker bees; project part FUB
- Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection pathogen resistent honey bees based on gene expression differences of hygienic and not hygienic not worker bees; project part Düsseldorf - Detailsof Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection pathogen resistent honey bees based on gene expression differences of hygienic and not hygienic not worker bees; project part Düsseldorf
- Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection pathogen resistent honey bees based on gene expression differences of hygienic and not hygienic not worker bees; project part FBN - Detailsof Collaborative project: FUGATO-plus - HyBee - developing molecular methods for the selection pathogen resistent honey bees based on gene expression differences of hygienic and not hygienic not worker bees; project part FBN
FUGAPIS - functional genome analysis for disease resistance in the honey bee (Apis mellifera)
- Collaborative project: FUGATO-plus - FUGAPIS - functional genome analysis for disease resistance in the honey bee (Apis mellifera); subproject Halle - Detailsof Collaborative project: FUGATO-plus - FUGAPIS - functional genome analysis for disease resistance in the honey bee (Apis mellifera); subproject Halle
- Functional genome analysis for disease resistance in honey bees - Detailsof Functional genome analysis for disease resistance in honey bees
- Functional genome analysis for disease resistance in honey bees (Apis mellifera) - Detailsof Functional genome analysis for disease resistance in honey bees (Apis mellifera)
REMEDY - Reproductive and metabolic problems in the dairy cow
- Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; subprojects P5, P6, P7 and P8 - Detailsof Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; subprojects P5, P6, P7 and P8
- Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; project P2 - Detailsof Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; project P2
- Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; project P4 - Detailsof Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; project P4
- Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; project P1 and P3 - Detailsof Collaborative project: FUGATO-plus - REMEDY - Reproductive and metabolic problems in the dairy cow; project P1 and P3
RePoRI - the development of genetic markers for resistance to respiratory infections in pigs
- Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project Tiho - Detailsof Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project Tiho
- Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project Giessen University - Detailsof Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project Giessen University
- Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project MMH - Detailsof Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project MMH
- Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project MPI - Detailsof Collaborative project: FUGATO-plus - RePoRI - the development of genetic markers for resistance to respiratory infections in pigs; project MPI
Genetic dialogue - The importance epistatic mechanisms in the characteristic expression for beef and pork
- Collaborative project: FUGATO-plus - Genetic dialogue - The importance epistatischer mechanisms in the characteristic expression in cattle and swine; subprojects FBN - Detailsof Collaborative project: FUGATO-plus - Genetic dialogue - The importance epistatischer mechanisms in the characteristic expression in cattle and swine; subprojects FBN
- Collaborative project: FUGATO-plus - Genetic dialogue - The importance epistatischer mechanisms in the characteristic expression in cattle and swine; subproject Kiel University - Detailsof Collaborative project: FUGATO-plus - Genetic dialogue - The importance epistatischer mechanisms in the characteristic expression in cattle and swine; subproject Kiel University
- Collaborative project: FUGATO-plus - Genetic dialogue - The importance epistatischer mechanisms in the characteristic expression in cattle and swine; subproject Bonn University - Detailsof Collaborative project: FUGATO-plus - Genetic dialogue - The importance epistatischer mechanisms in the characteristic expression in cattle and swine; subproject Bonn University
MeGA-M - Metabolomic and genomic analysis of milk for healthy dairy cows
- Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project TU Munich - Detailsof Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project TU Munich
- Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project Kiel University - Detailsof Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project Kiel University
- Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project FBN - Detailsof Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project FBN
- Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project FU Berlin - Detailsof Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project FU Berlin
- Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project HZ Munich - Detailsof Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project HZ Munich
- Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project Regensburg University - Detailsof Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project Regensburg University
- Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project Tiho Hanover - Detailsof Collaborative project: FUGATO-plus - MeGA-M - Metabolomische and genomic analysis of milk for healthy dairy cows; project Tiho Hanover
FEPROeXPRESS - Fetal Programming by food protein deficit and surplus: relevance to the productivity associated characteristics, tissue gene and protein expression in pigs
- Collaborative project: FUGATO-plus - FEPROeXPRESS - Fetal Programming by dietary protein deficit and surplus: relevance to the characteristics associated with productivity, tissue-specific gene and protein expression in pigs; Subproject FBN - Detailsof Collaborative project: FUGATO-plus - FEPROeXPRESS - Fetal Programming by dietary protein deficit and surplus: relevance to the characteristics associated with productivity, tissue-specific gene and protein expression in pigs; Subproject FBN
- Collaborative project: FUGATO-plus - FEPROeXPRESS - Fetal Programming by dietary protein deficit and surplus: relevance to the characteristics associated with productivity, tissue-specific gene and protein expression in pigs; Subproject Bonn University - Detailsof Collaborative project: FUGATO-plus - FEPROeXPRESS - Fetal Programming by dietary protein deficit and surplus: relevance to the characteristics associated with productivity, tissue-specific gene and protein expression in pigs; Subproject Bonn University
GenoTrack - high-throughput SNP typing for the genomic selection in cattle, association population genetic studies and analyses of the bovine genome
- Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject University of Kiel - Detailsof Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject University of Kiel
- Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject Humbold University of Berlin - Detailsof Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject Humbold University of Berlin
- Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject University of Göttingen - Detailsof Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject University of Göttingen
- Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject Technical University of Munic - Detailsof Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject Technical University of Munic
- Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject VIT - Detailsof Collaborative project: FUGATO-plus - GenoTrack - high-throughput SNP typing for genomic selection in cattle, association studies and population genetic analysis of the bovine genome; Subproject VIT
GENE-FL - Genetic bases of stability foundation for beef, pork, horse and sheep
- Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; Subproject Halle: Engen candidate list, collection of phenotypes in cattle, statistical analysis - Detailsof Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; Subproject Halle: Engen candidate list, collection of phenotypes in cattle, statistical analysis
- Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; subprojects FBN: Genomic Approaches for leg weakness in pigs, OC / OCD at the horse and Laminitis (Klauenrehe) in cattle - Detailsof Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; subprojects FBN: Genomic Approaches for leg weakness in pigs, OC / OCD at the horse and Laminitis (Klauenrehe) in cattle
- Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; subprojects Bonn: Analysis of associations, couplings and effects and phenotype characterization and expression analysis of selected functional candidate genes in pigs - Detailsof Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; subprojects Bonn: Analysis of associations, couplings and effects and phenotype characterization and expression analysis of selected functional candidate genes in pigs
- Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; subprojects Göttingen: Fine mapping and candidate Engen analysis of QTL regions of cattle and sheep phenotypic characterization of mouth regarding quality and resistance Moderhinke - Detailsof Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; subprojects Göttingen: Fine mapping and candidate Engen analysis of QTL regions of cattle and sheep phenotypic characterization of mouth regarding quality and resistance Moderhinke
- Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; Casting Project: Molecular Genetic characterization and analysis of the association of candidate genes for quality and mouth Moderhinke resistance in sheep - Detailsof Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; Casting Project: Molecular Genetic characterization and analysis of the association of candidate genes for quality and mouth Moderhinke resistance in sheep
- Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; Subproject Kiel: elucidation of the genetic basis for the occurrence of Osteochondrosis / Osteochondrosis dissecans in German warmblood horses - Detailsof Collaborative project: FUGATO-plus - GENE-FL - Genetic Foundations foundation of stability for beef, pork, horse and sheep; Subproject Kiel: elucidation of the genetic basis for the occurrence of Osteochondrosis / Osteochondrosis dissecans in German warmblood horses
FUGATO + brain - developing an expert system to transfer the results of the functional animal genome research in breeding programmes
- Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; Subproject Göttingen University: Enlargement of the gene flow method and optimization of the breeding planning when using genomic selection - Detailsof Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; Subproject Göttingen University: Enlargement of the gene flow method and optimization of the breeding planning when using genomic selection
- Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; Subproject TU Munich: consideration realistic mating strategies to optimize breeding programs - Detailsof Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; Subproject TU Munich: consideration realistic mating strategies to optimize breeding programs
- Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; LFL Project: Implementation of real mating strategies and design optimization for QTL Verification - Detailsof Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; LFL Project: Implementation of real mating strategies and design optimization for QTL Verification
- Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; project FBN - Detailsof Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; project FBN
- Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs, University of Kiel Project: Expansion of the selection index method and optimum contribution selection with markers - Detailsof Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs, University of Kiel Project: Expansion of the selection index method and optimum contribution selection with markers
- Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; project VIT: creation of programs to optimize the breeding planning and mating with genomic information - Detailsof Collaborative project: FUGATO-plus - FUGATO + brain - the development of an expert system to transfer the results of the functional genome research in livestock breeding programs; project VIT: creation of programs to optimize the breeding planning and mating with genomic information


